Bioinformatics Developer
Budget: $3,000 – $5,000 USD
Develop web based application:
1. Read and process data files FASTQ to CRAM to BAM to Variants. The goal is to produce EXCEL compatible output.
2. Detect and compare the genetics codes to reference genomes.
3. Produce a final output results.
I prefer to work in a phased manner, in your proposal submit how you prefer to divide the project in phases.
I am open to the idea of a script that can automate the conversion of FASTQ to CRAM files (BWA-MEM2, GEM, etc), to BAM files (SAMTools, etc) and to Variants (BCF Tools, etc). However, the entire process should be seamless and continuous.
I can provide more details upon request.
1. Read and process data files FASTQ to CRAM to BAM to Variants. The goal is to produce EXCEL compatible output.
2. Detect and compare the genetics codes to reference genomes.
3. Produce a final output results.
I prefer to work in a phased manner, in your proposal submit how you prefer to divide the project in phases.
I am open to the idea of a script that can automate the conversion of FASTQ to CRAM files (BWA-MEM2, GEM, etc), to BAM files (SAMTools, etc) and to Variants (BCF Tools, etc). However, the entire process should be seamless and continuous.
I can provide more details upon request.